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SELECTED PUBLICATIONS

  • Tarca AL, Lauria M, Unger M, Bilal E, Boue S, Dey KK, Hoeng J, Koeppl H, Martin F, Meyer P, Nandy P, Norel R, Peitsch M, Rice JJ, Romero R, Stolovitzky G, Talikka M, Xiang Y, Zechner C, and IMPROVER DSC Collaborators, Strengths and Weaknesses of Microarray-based Phenotype Prediction: Lessons Learned from the IMPROVER Diagnostic Signature Challenge, Bioinformatics, doi: 10.1093/bioinformatics/btt492, 2013.
  • Tarca AL, Than NG, Romero R. Methodological approach from the Best Overall Team in the IMPROVER Diagnostic Signature Challenge. Systems Biomedicine; In press; http://dx.doi.org/10.4161/sysb.25980, 2013.
  • A Novel Signaling Pathway Impact Analysis (SPIA). Bioinformatics 2009;25:75-82. Tarca AL, Draghici S, Khatri P, Hassan S, Mittal P, Kim JS, Kim CJ, Kusanovic JP, Romero R
  • A systems biology approach for pathway level analysis. Genome Research 2007; 17:1537-45. Draghici S, Khatri P, Tarca AL, Amin K, Done A, Voichita C, Georgescu C, Romero R
  • Signature pathways identified from gene expression profiles in the human uterine cervix before and after spontaneous term parturition. American Journal of Obstetrics and Gynecology 2007;197:250-57. Hassan SS, Romero R, Tarca AL, Draghici S, Pineles B, Bugrim A, Khalek N, Camacho N, Mittal P, Yoon BH, Espinoza J, Kim CJ, Sorokin Y, Malone J, Jr
  • Machine learning and its applications to biology. PLoS Computational Biology 2007;3:e116. Tarca AL, Carey VJ, Chen XW, Romero R, Draghici S
  • Analysis of microarray experiments of gene expression profiling. American Journal of Obstetrics and Gynecology 2006; 195:373-88. Tarca AL, Romero R, Draghici S